discriminatEM

User’s Guide

• Installation
  • Preparation
  • PIP
  • Running the unit- and integration tests
• Model selection from the command line with discriminatEM
  • Installation
  • Optional: configuration of the parallel environment
  • Running model selection
  • Examination of the results
  • Reproduction of Figures 4a, 4b and 4c of the manuscript
• Quickstart
  • Network generation
  • Network analysis
  • Noise
• The connectome package
  • Creating networks - Sampling from stochastic network models
  • Networks
  • Network analysis
  • Noise in networks
  • Monte Carlo sampling based analysis
  • Building composite models
  • Functional model testing
  • ABC with network models
• License
  • Author
  • License text

API reference

• Connectome models
• Connectome analysis
• Connectome noise
• Network shuffling
• Path enumeration sampling
• Connectome builder
• Connectome function
  • Tasks
  • Criteria
  • Test runners
  • Test results
• Connectome ABC Tasks
• ABC-SMC
• Parallel job execution
• RNN

Indices and tables

• Index

• Module Index

• Search Page